CDS

Accession Number TCMCG017C18999
gbkey CDS
Protein Id OMO86424.1
Location complement(join(26907..27056,27170..27385,27481..27683,27788..28004,28100..28252))
GeneID InterPro:IPR001841
Organism Corchorus olitorius
locus_tag COLO4_21172

Protein

Length 312aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01017575.1
Definition Zinc finger, RING-type [Corchorus olitorius]
Locus_tag COLO4_21172

EGGNOG-MAPPER Annotation

COG_category O
Description E3 ubiquitin-protein ligase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K16274        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000209        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009787        [VIEW IN EMBL-EBI]
GO:0009788        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009968        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010648        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023057        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043161        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901419        [VIEW IN EMBL-EBI]
GO:1901420        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1905957        [VIEW IN EMBL-EBI]
GO:1905958        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAATCTTCTTCAGATGCAAGCTTGAAGCAACAATTAGAGGAATTACAGAAACAGCTTGGGAAGAAACAGAGATTCGAAGAAGCAGTTTCATCTATCAATTCCCTTCTTAAACTCCATTACCCTTCTGCCTCTCCTTCTCTTCGCAAATCTTTTTATTCTGTTGTTTGCCGAGTTGCAACTATTTTAAAAACCAGATACACCGCCCCTGGCTTTTGGCTTGCTGGTTTACGTCTTTTCGAGCTATTAGAATCCCTTGTCTCTGATCCTTCTGAAAAGGGTCATTTAAGGAATTGTATTTCTCAGGCTAAGGAACACTTGAATGAATTAGAAAACCCAGTCCCATTATCGGATTCTCCCCAAAATAGAGGTTATCTTTTTGAAGGGCATCTTACGGTGGATCCTGAACCACCACAACCTCAATGGTTGGTCGCATCAAATCTCATGAACGCTTATGCTTCTGCTGCAACCGCTGAATCTTCTCAGGGTTCGGCTGGGAATGTTAACACAGTTGAAAATGCTGCCAATGTGCTTGAACAGCTCATTAATCACCTTGATACTGTTATACCTGAGATATTGGAGAATGAGGGCGGTGCCCGAAGAGTACCACCTGCTAGTAAAGAAGTTGTTGCCAAACTTCCAATTATTACTCTTACAGAAGAAATCCTGGCTAAGCTTGGGTCTGAAGCAGAATGTGCAATATGCAAGGAAAATCTTGTTGTAGGAGATAGCATGCAAGAATTGCCTTGCAAGCACACATTCCACCCTCCTTGTCTAAAGCCATGGCTGGATGAGCACAATTCTTGCCCAATTTGTAGATATGAGCTGAAAACAGACGATCATGATTATGAGAGCTGGAAGGAGAGGGAGAAAGAGGCAGAAGAAGAGAGAAAAGGTGCTGCAAATGCTGTTCGTGGTGGCGAATACATGTATGTGTAG
Protein:  
MESSSDASLKQQLEELQKQLGKKQRFEEAVSSINSLLKLHYPSASPSLRKSFYSVVCRVATILKTRYTAPGFWLAGLRLFELLESLVSDPSEKGHLRNCISQAKEHLNELENPVPLSDSPQNRGYLFEGHLTVDPEPPQPQWLVASNLMNAYASAATAESSQGSAGNVNTVENAANVLEQLINHLDTVIPEILENEGGARRVPPASKEVVAKLPIITLTEEILAKLGSEAECAICKENLVVGDSMQELPCKHTFHPPCLKPWLDEHNSCPICRYELKTDDHDYESWKEREKEAEEERKGAANAVRGGEYMYV